Re: AIJ Image Display Interface for Fiji
Posted by
karenacollins on
Jul 02, 2013; 9:06pm
URL: http://astroimagej.170.s1.nabble.com/AIJ-Image-Display-Interface-for-Fiji-tp52p53.html
Hi Sarah,
The AstroImageJ image display interface requires changes to the
base ImageJ code and also requires two classes that extend
StackWindow (AstroStackWindow) and ImageCanvas (AstroCanvas). There
will be other files that the two new classes require, but they are
all in the distribution and you will readily see which ones you need
when you attempt to compile the code. The base ImageJ code changes
are scripted so they can be applied to new builds of ImageJ
periodically. I don't know much about FIJI or Clojure, so I am not
sure how transportable the script will be for your application.
Plus, there are changes that support other features of AIJ, so you
would need to sort those out. I'm not sure of your programming
experience, but I think there might be a long learning curve to get
this project going, and might take a good deal of time. If you are
still interested to tackle the project, I am happy send you the
ImageJ modification script. Just email me at karen period collins at
physics period louisville period edu.
The AIJ specific source code is in the Astronomy_.jar file if
you want to look at it. The modified ImageJ source code is in ij.jar
if that helps.
By the way, I think I have found a way to duplicate the small
screen image display bug you reported, but I haven't found a fix yet
(I haven't really had time to dig in deep enough yet - but I will).
Karen
On 7/2/2013 4:58 AM, sarah [via
AstroImageJ] wrote:
Hi
I'm using AstroImageJ, but I'm also using Fiji (http://fiji.sc/Fiji) for
developing plugins in Clojure. I find the AstroImageJ Image
Display very helpful for Astronomical images, especially the auto
brightness & contrast tool and the histogram. It would help a
lot to have this interface also in Fiji.
Since the program is open source, I thought I could find the
source for this features and implement them in my Fiji. Could you
tell me, what files I would have to take from AstroImageJ?
Thank you!
Sarah