Section 10 in the user guide will walk you through how to do time series
photometry:
http://www.astro.louisville.edu/software/astroimagej/guide/AstroImageJ_User_Guide.pdfIn my estimation, more amateur astronomers use AIJ than professionals.
Here is a user guide that was written by an amateur astronomer for
amatuer astronomers and explains how to perform transiting exoplanet
observations. That should also be adaptable to what you need to do:
http://www.astrodennis.com/The only difference in the above examples and yours is that you need
only one aperture instead of many, and you need to plot the
Source-Sky_T1 data column rather than rel_flux_T1 data column.
AstroImageJ is a Graphical User Interface based program, so no
programming skills are required.
Karen
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NAML